Results
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Property | Organism | Value | Units | ID | Details |
---|---|---|---|---|---|
Effect of the external pH on pHi [intracellular pH] of cells | Budding yeast Saccharomyces cerevisiae | Figure - link | unitless | 110912 | Valli M et al., Intracellular... |
Burst size | Bacteriophage Lambda | 153.9 (±7.2 Table - link) | Phages/cell | 105025 | Shao Y, Wang IN. Effect... |
Size of icosahedral virion | Cowpea Chlorotic Mottle Virus (CCMV) | 28 | nm | 106456 | Minten IJ, Ma Y, Hempenius MA... |
Capsid size of S3 myophage | Bacteriophage S3 (host Stenotrophomonas) | 82.92 (+-1.25) | nm | 104853 | García P, Monjardín C... |
Capsid size of S1 Siphovirus | Bacteriophage S1 (host Stenotrophomonas) | 61.4 (±1.35) | nm | 104854 | García P, Monjardín C... |
Burst size of S3 myophage | Bacteriophage S3 (host Stenotrophomonas) | 100 | Virions/cell | 104852 | García P. et al., Isolation... |
Escherichia coli bacteriophage concentration in gut | Mammals | human 10^3 - 10^4: cows and pigs ≤10^7 | phages/gram feces | 117014 | Fortier LC, Sekulovic... |
Burst size of S1 Siphovirus | Bacteriophage S1 (host Stenotrophomonas) | ~75 | Virions/cell | 104855 | García P. et al., Isolation... |
Extracellular pH [pHe] and intracellular pH [pHi] in cancer cells compared to normal cells | Human Homo sapiens | Figure - link | unitless | 112180 | Damaghi M, Wojtkowiak JW... |
Rate of transcription of bacteriophage T7 DNA | Bacteria Escherichia coli | 40 | bp/sec | 106941 | García LR, Molineux IJ.... |
Average replication rate of T7 bacteriophage DNA | Bacteria Escherichia coli | 220 (±80) | nucleotides/sec | 103995 | Lee JB, Hite RK, Hamdan SM... |
Packaged volume fractions of some bacteriophage and eukaryotic viruses | Virus | Table - link | N/A | 111591 | Purohit PK et al., Forces... |
DNA packaging | Various | Cells other than in sperm nuclei, in vivo ∼5–10% viral capsids 55% | % | 111739 | Liu T et al., Solid-... |
Fraction of >5,100 phages studied since 1960s that possess tails and belong to Myoviridae, Siphoviridae and Podoviridae families | Bacteriophage | ~96 | % | 113976 | Rios AC et al., Alternatives... |
Number of phage particles that is adequate to induce replication and therapeutic action at bacterial infections | Bacteriophage | 100 - 1,000 | plaque forming units (PFU) | 113977 | Rios AC et al., Alternatives... |
The sizes of DNA and viral particles for some bacterial viruses (bacteriophages) | Bacteriophage | Table - link | N/A | 110301 | David L. Nelson, Michael... |
Replication rate of T7 bacteriophage DNA leading strand | Bacteria Escherichia coli | 164 (±20) | bp/sec | 103806 | Lee JB, Hite RK, Hamdan SM... |
Processivity of DNA polymerase to T7 bacteriophage DNA | Bacteria Escherichia coli | 800 (±30) | nucleotides | 103996 | Lee JB, Hite RK, Hamdan SM... |
Distance (ds) between DNA strands in full capsid | Bacteriophage | ~2.8 | nm | 111589 | Purohit PK et al., Forces... |
Volume of protein + DNA | Bacteriophage T7 | 1.14e-4 (±0.000005) | µm^3 | 100232 | Stroud et al. Assembly... |